MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Parabacteroides goldsteinii
19428wG3_P14
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
NCBI Genome Annotation:
contigs: 123
bases: 6,785,295 bps
CDS: 5,304
rRNA: 13
tRNA: 69
tmRNA: 1
Total number of protein coding genes annotated/found:
5,206
Display
20
50
100
All items per page
🡄
Items 21 - 40
🡆
click arrow to navigate by page or
of 261 pages
Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5019|JADGKT010000004.1
MBF0763929.1
Genome Viewer
NA
AA
2673/891
218353-215681
outer membrane protein assembly factor BamA
SEQF5019|JADGKT010000039.1
MBF0767478.1
Genome Viewer
NA
AA
813/271
39199-38387
outer membrane protein assembly factor BamD
SEQF5019|JADGKT010000032.1
MBF0767117.1
Genome Viewer
NA
AA
459/153
30527-30069
thioredoxin-dependent thiol peroxidase
SEQF5019|JADGKT010000001.1
MBF0763107.1
Genome Viewer
NA
AA
981/327
233216-234196
biotin synthase BioB
SEQF5019|JADGKT010000001.1
MBF0763111.1
Genome Viewer
NA
AA
762/254
237262-238023
malonyl-ACP O-methyltransferase BioC
SEQF5019|JADGKT010000001.1
MBF0763112.1
Genome Viewer
NA
AA
684/228
238027-238710
ATP-dependent dethiobiotin synthetase BioD
SEQF5019|JADGKT010000057.1
MBF0767940.1
Genome Viewer
NA
AA
1107/369
8910-10016
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
SEQF5019|JADGKT010000022.1
MBF0766282.1
Genome Viewer
NA
AA
3219/1073
54579-51361
carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit
SEQF5019|JADGKT010000057.1
MBF0767941.1
Genome Viewer
NA
AA
3225/1075
10130-13354
carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit
SEQF5019|JADGKT010000010.1
MBF0764867.1
Genome Viewer
NA
AA
795/265
170342-171136
cytochrome c biogenesis protein CcsA
SEQF5019|JADGKT010000011.1
MBF0764914.1
Genome Viewer
NA
AA
2451/817
33111-35561
cytochrome c biogenesis protein CcsA
SEQF5019|JADGKT010000036.1
MBF0767360.1
Genome Viewer
NA
AA
2589/863
52650-55238
ATP-dependent chaperone ClpB
SEQF5019|JADGKT010000008.1
MBF0764503.1
Genome Viewer
NA
AA
669/223
81408-80740
ATP-dependent Clp endopeptidase proteolytic subunit ClpP
SEQF5019|JADGKT010000008.1
MBF0764502.1
Genome Viewer
NA
AA
1230/410
80677-79448
ATP-dependent Clp protease ATP-binding subunit ClpX
SEQF5019|JADGKT010000031.1
MBF0767039.1
Genome Viewer
NA
AA
1440/480
21534-22973
cardiolipin synthase
SEQF5019|JADGKT010000015.1
MBF0765445.1
Genome Viewer
NA
AA
1203/401
8592-9794
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
SEQF5019|JADGKT010000009.1
MBF0764681.1
Genome Viewer
NA
AA
462/154
113652-114113
pantetheine-phosphate adenylyltransferase
SEQF5019|JADGKT010000042.1
MBF0767593.1
Genome Viewer
NA
AA
843/281
37379-36537
type II pantothenate kinase
SEQF5019|JADGKT010000027.1
MBF0766829.1
Genome Viewer
NA
AA
534/178
102319-102852
alpha-ribazole phosphatase
SEQF5019|JADGKT010000027.1
MBF0766824.1
Genome Viewer
NA
AA
951/317
98387-99337
cobalamin biosynthesis protein CobD
🡄
Items 21 - 40
🡆
click arrow to navigate by page or
of 261 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI,UID,Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by
